The 2003 UEFA Intertoto Cup finals were won by Schalke 04, Villarreal, and Perugia. All three teams advanced to the UEFA Cup.
This game was declared void by UEFA due to fan incident at the stadium with smoke bomb thrown onto the field. The second leg game by itself determined the result of the matchup.
2–2 on aggregate, Pasching won on away goals rule.
Lierse won 7–1 on aggregate.
Pobeda won 7–2 on aggregate.
3–3 on aggregate, Partizani won on away goals rule.
3–3 on aggregate, Brno won on away goals rule.
Koper won 3–2 on aggregate.
Örgryte IS won 4–1 on aggregate.
3–3 on aggregate, Győr won on away goals rule.
Marek Dupnitsa won 5–4 on aggregate.
Shamrock Rovers won 3–1 on aggregate.
2–2 on aggregate, Tampere United won on away goals rule.
Sutjeska won 4–1 on aggregate.
Gloria Bistrița won 6–2 on aggregate.
OFK Beograd won 5–3 on aggregate.
Wil won 2–1 on aggregate.
Tobol won 5–1 on aggregate.
ZTS Dubnica won 7–1 on aggregate.
Dacia Chișinău won 5–1 on aggregate.
2–2 on aggregate, Sloboda Tuzla won on penalties.
Shakhtyor Soligorsk won 8–1 on aggregate.
Allianssi won 2–1 on aggregate.
Allianssi won 1–0 on aggregate.
4–4 on aggregate, Nice won on away goals rule.
Slovácko won 4–3 on aggregate.
2–2 on aggregate, Racing de Santander won on away goals rule.
Slovan Liberec won 4–0 on aggregate.
Brno won 4–3 on aggregate.
Brescia won 3–2 on aggregate.
Wolfsburg won 3–1 on aggregate.
Cibalia won 5–3 on aggregate.
Tobol won 3–0 on aggregate.
Wil won 4–3 on aggregate.
Pasching won 3–2 on aggregate.
Lierse won 5–2 on aggregate.
Tampere United won 1–0 on aggregate.
Dacia Chișinău won 5–0 on aggregate.
3–3 on aggregate, Koper won on away goals rule.
Pasching won 4–0 on aggregate.
Perugia won 4–0 on aggregate.
Koper won 5–4 on aggregate.
Nantes won 5–3 on aggregate.
Werder Bremen won 1–0 on aggregate.
Villarreal won 3–1 on aggregate.
Brno won 5–4 on aggregate.
Schalke 04 won 3–1 on aggregate.
Slovan Liberec won 3–1 on aggregate.
Wolfsburg won 3–0 on aggregate.
Cibalia won 2–1 on aggregate.
Heerenveen won 5–1 on aggregate.
Heerenveen won 2–1 on aggregate.
Wolfsburg won 8–1 on aggregate.
Schalke 04 won 2–1 on aggregate.
Pasching won 5–1 on aggregate.
Perugia won 1–0 on aggregate.
Villarreal won 3–1 on aggregate.
Schalke 04 won 2–0 on aggregate.
Perugia won 3–0 on aggregate.
Villarreal won 2–1 on aggregate.